Sorry to bug again, I'd like to change the aspect of the bonds I selected using a python code. I'd like a wide wire representation. I am not sure how to handle the Wire attribute. With the drawMode I can switch the representation from ball and stick to wire. However, I do not manage to change the width. I thought that radius would work out but it sounds that is does not work for this mode. Any help? Cheers JD for b in chimera.selection.currentBonds(): b.drawMode=0 b.radius=1 Dr. Jean-Didier Maréchal Lecturer The Computational Biotechnological Chemistry Team Unitat de Química Física Departament de Química Universitat Autònoma de Barcelona Edifici C.n. 08193 Cerdanyola (Barcelona) Tel: +34.935814936 e-mail: JeanDidier.Marechal@uab.es www: http://asklipio.qf.uab.es ----- Missatge original ----- De: Jean Didier Pie Marechal <JeanDidier.Marechal@uab.cat> Data: Dijous, Octubre 11, 2012 2:19 pm Assumpte: Re: attribute for selection?
Sorry,
just to clarify my previous request:
this is a script that does what I want though a selection attribute would be faster I think.
for a in chimera.openModels.list()[0].atoms: if a in chimera.selection.currentAtoms(): print "this atom of the molecule is selected" #to say somethingelse: print "this one isn't"
cheers
Dr. Jean-Didier Maréchal Lecturer The Computational Biotechnological Chemistry Team Unitat de Química Física Departament de Química Universitat Autònoma de Barcelona Edifici C.n. 08193 Cerdanyola (Barcelona) Tel: +34.935814936 e-mail: JeanDidier.Marechal@uab.es www: http://asklipio.qf.uab.es
----- Missatge original ----- De: Jean Didier Pie Marechal <JeanDidier.Marechal@uab.cat> Data: Dijous, Octubre 11, 2012 12:39 pm Assumpte: attribute for selection?
HI,
I want to add attributes to atoms that are selected and those that aren't. I thought that atoms had a selection attribute already defined in chimera (something like a boolean) but I don't find it. I am wrong with that?
best, JD
Dr. Jean-Didier Maréchal Lecturer The Computational Biotechnological Chemistry Team Unitat de Química Física Departament de Química Universitat Autònoma de Barcelona Edifici C.n. 08193 Cerdanyola (Barcelona) Tel: +34.935814936 e-mail: JeanDidier.Marechal@uab.es www: http://asklipio.qf.uab.es