Dear all, would it be possible to have xyz format accepted for the MD movie tool. Someting identical to the PDB (with both multiple xyz file or unique xyz file containing several structures) would be more than enough. We frequently use this standard and that would be useful for us to have such possbility. All the best, JD Dr. Jean-Didier Maréchal Lecturer Computational Biotechnological Chemistry @ Transmet Unitat de Química Física Departament de Química Universitat Autònoma de Barcelona Edifici C.n. 08193 Cerdanyola (Barcelona) Tel: +34.935814936 e-mail: JeanDidier.Marechal@uab.es ----- Missatge original ----- De: chimera-dev-request@cgl.ucsf.edu Data: Dilluns, Novembre 23, 2009 9:00 pm Assumpte: Chimera-dev Digest, Vol 70, Issue 2
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Today's Topics:
1. Rotation about the axis of symmetry (Liam Browne) 2. Re: Rotation about the axis of symmetry (Elaine Meng)
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Message: 1 Date: Mon, 23 Nov 2009 10:06:26 +0000 From: Liam Browne <liam.browne@hotmail.co.uk> To: <chimera-dev@cgl.ucsf.edu> Subject: [chimera-dev] Rotation about the axis of symmetry Message-ID: <COL124-W33C2F39CCE1734F40BEB30B69E0@phx.gbl> Content-Type: text/plain; charset="iso-8859-1"
Hi all,
I want to rotate a model by 90 degrees about the axis of symmetry, but I seem to be having problems setting the axis correctly.
After two identical models are superimposed I use measure rotation and get the following:
Matrix rotation and translation -0.04092271 -0.36724445 0.92922379 -82.20183653 -0.91203666 0.39354649 0.11537022 -54.21831923 -0.40806183 -0.84276490 -0.35104539 11.47082481 Axis -0.55288898 0.77167664 -0.31437070 Axis point -56.22800779 0.00000000 25.47389901 Rotation angle (degrees) 119.94780111 Shift along axis 0.00338820
What should I do to rotate the model at the same axis but by 90 degrees? Many thanks, Liam
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