
Hello all! I'm looking to the scripts ( http://plato.cgl.ucsf.edu/trac/chimera/attachment/wiki/Scripts/) and can not see a simple example of how to open a PDB. What I need to my extension is to save a PDB relative to a map and then open it to the model panel. Copying it to the model panel does not make sense to me because I need to fix the positions of the moved PDB relative to the map. Could it be something like this? * # Get opened molecule (the one selected in the menu)* * m = self.object_menu.getvalue()* * # Make copy using the copy_molecule native functionality from Chimera* * from Molecule import copy_molecule* * mc = copy_molecule(m)* * # Set copy name* * mc.name <http://mc.name> = m.name.split('.')[0] + '_' + self.chosen_solution + '.pdb'* * copy_path = self.cwd + mc.name <http://mc.name>* * from Midas import open, write* * write(mc, self.map_menu.volume(), self.cwd)* * open(self.cwd)* Thank you in advance!