Dear all, sorry to bother you again. I want to perform a conformational search rotating residues around their chelation bond with a metal. With the adjust torsion tool, I can't rotate around pseudo bond, and I actually need to transform the different pseudo bonds in bonds. Could you authorize pseudo bonds to be rotated around? (in the contrary I'll continue with transforming pseudo bonds in bonds, but I thought that remaining with pseudo bonds is better especially when you do "add hydrogens" or other stuffs afterwards ) All the best, JD Dr. Jean-Didier Maréchal Lecturer Computational Biotechnological Chemistry @ Transmet Unitat de Química Física Departament de Química Universitat Autònoma de Barcelona Edifici C.n. 08193 Cerdanyola (Barcelona) Tel: +34.935814936 e-mail: JeanDidier.Marechal@uab.es ----- Missatge original ----- De: chimera-dev-request@cgl.ucsf.edu Data: Dimecres, Maig 13, 2009 9:00 pm Assumpte: Chimera-dev Digest, Vol 64, Issue 5
Send Chimera-dev mailing list submissions to chimera-dev@cgl.ucsf.edu
To subscribe or unsubscribe via the World Wide Web, visit http://www.cgl.ucsf.edu/mailman/listinfo/chimera-dev or, via email, send a message with subject or body 'help' to chimera-dev-request@cgl.ucsf.edu
You can reach the person managing the list at chimera-dev-owner@cgl.ucsf.edu
When replying, please edit your Subject line so it is more specific than "Re: Contents of Chimera-dev digest..."
Today's Topics:
1. [Chimera-dev] Compiling chimera from source code (christopher lau) 2. Re: [Chimera-dev] Compiling chimera from source code (Greg Couch)
-------------------------------------------------------------------- --
Message: 1 Date: Tue, 12 May 2009 21:15:56 -0700 From: christopher lau <chris.d.lau@gmail.com> Subject: [chimera-dev] [Chimera-dev] Compiling chimera from source code To: chimera-dev@cgl.ucsf.edu Message-ID: <f2026a300905122115w3cd5df71mdc8090670593ad94@mail.gmail.com> Content-Type: text/plain; charset="iso-8859-1"
Dear Madam/Sir,
I am currently involved in a project which requires compiling the Chimerasource code from scratch. I have been using:
http://www.cgl.ucsf.edu/chimera/sourcecode.html
for reference, and I understand that surfacing library is not availabledue to licensing issues. Because I am not interested in using this feature, I wanted to know if it was still possible to compile the Chimerasource code. I know that it will be difficult but any knowledge or past experience that may help me would be greatly appreciated.
Thanks in advance,
Chris