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28 May
2012
28 May
'12
9:57 a.m.
Hello, I'm trying to create a chimera script and am stumped. I'm trying to iterate through a series of PDB entries that contain a specific protein-protein interaction (some are NMR ensembles) to create a list of residues that within specific distances of the binding interface. I am able to successfully iterate through pdb files and residues, but am having difficulty iterating through chains of NMR ensembles. Is there a variable like m.chains or is the number of chains accessible through chimera.openModels.list? Also, do you have any example scripts that could help me? Sincerely, Ryan Doherty