Hi Max, How about trying the ChimeraX matrixget command to output the positions of all the models to a file? https://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/matrixset.html This gives both the rotation (a 3x3 matrix in the first 3 columns) and a translation (4th column). The translation is in Angstroms, not in grid index units. Tom
On Mar 4, 2024, at 4:04 PM, Maximilian Julian Pokutta via Chimera-dev <chimera-dev@cgl.ucsf.edu> wrote:
Dear Chimera Dev Team,
I have a chimera session with the ~500 maps overlayed onto a tomogram saved, and I would like to get their coordinates in relation to the tomogram on which they are overlayed. I am unsure how to get started on this and wanted to know if you had any pointers as to where to start.
Best, Max _______________________________________________ Chimera-dev mailing list -- chimera-dev@cgl.ucsf.edu <mailto:chimera-dev@cgl.ucsf.edu> To unsubscribe send an email to chimera-dev-leave@cgl.ucsf.edu <mailto:chimera-dev-leave@cgl.ucsf.edu>