Hi, In the workshop last week I asked some of you about the collaboratory tool. Well, I'm making some tests and, so far, it has more or less worked between two computers in our lab. Now I want to try 'outside' the university firewall. But during the tests, Chimera has crashed a couple of times when I was joining the session I had just started. I include the error report generated by my computer (a PowerBook G4). I don't think I made anything different the times it has worked than the times the program crashed. Hope the error report makes some sense to you. Thanks, xavi *********************************************** Date/Time: 2005-11-21 13:59:03.443 -0800 OS Version: 10.4.3 (Build 8F46) Report Version: 3 Command: python2.4 Path: /Applications/Chimera.app/Contents/Resources/bin/python2.4 Parent: WindowServer [48] Version: 1.2184 (1.2184) PID: 854 Thread: 0 Exception: EXC_BAD_ACCESS (0x0001) Codes: KERN_INVALID_ADDRESS (0x0001) at 0x7fffdead Thread 0 Crashed: 0 libomniORB4.0.dylib 0x0314b1d8 parse_lsda_header(_Unwind_Context*, unsigned char const*, lsda_header_info*) + 48 (icplusplus.c:27) 1 libomniORB4.0.dylib 0x0314b494 __gxx_personality_v0 + 164 (icplusplus.c:27) 2 _omnipymodule.so 0x030850ac _Unwind_RaiseException_Phase2 + 124 3 _omnipymodule.so 0x03085420 _Unwind_Resume + 104 4 _omnipymodule.so 0x0305c764 omniPy::Py_omniCallDescriptor::userException(cdrStream&, omni::IOP_C*, char const*) + 284 5 libomniORB4.0.dylib 0x031021e4 omniRemoteIdentity::dispatch(omniCallDescriptor&) + 492 (icplusplus.c:27) 6 libomniORB4.0.dylib 0x030e981c omniObjRef::_invoke(omniCallDescriptor&, bool) + 500 (icplusplus.c:27) 7 _omnipymodule.so 0x03052918 omnipy_invoke + 376 8 python2.4 0x0008d3c8 call_function + 948 (ceval.c:3558) 9 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 10 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 11 python2.4 0x0008d6ac fast_function + 360 (ceval.c:3651) 12 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 13 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 14 python2.4 0x0008d618 fast_function + 212 (ceval.c:3642) 15 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 16 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 17 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 18 python2.4 0x0008d6ac fast_function + 360 (ceval.c:3651) 19 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 20 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 21 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 22 python2.4 0x0008d6ac fast_function + 360 (ceval.c:3651) 23 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 24 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 25 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 26 python2.4 0x000b84f4 function_call + 344 (funcobject.c:548) 27 python2.4 0x0001c2a0 PyObject_Call + 48 (abstract.c:1757) 28 python2.4 0x0008cfd0 PyEval_CallObjectWithKeywords + 256 (ceval.c:3426) 29 python2.4 0x000a48dc builtin_apply + 352 (bltinmodule.c:100) 30 python2.4 0x0008d3c8 call_function + 948 (ceval.c:3558) 31 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 32 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 33 python2.4 0x000b84f4 function_call + 344 (funcobject.c:548) 34 python2.4 0x0001c2a0 PyObject_Call + 48 (abstract.c:1757) 35 python2.4 0x000869a8 instancemethod_call + 788 (classobject.c:2448) 36 python2.4 0x0001c2a0 PyObject_Call + 48 (abstract.c:1757) 37 python2.4 0x0008cfd0 PyEval_CallObjectWithKeywords + 256 (ceval.c:3426) 38 _tkinter.so 0x0179ccb0 PythonCmd + 368 (_tkinter.c:1999) 39 libtcl8.4.dylib 0x0a00dc94 TclInvokeStringCommand + 148 (icplusplus.c:27) 40 libtcl8.4.dylib 0x0a00ee58 TclEvalObjvInternal + 676 (icplusplus.c:27) 41 libtcl8.4.dylib 0x0a0326ec TclExecuteByteCode + 2536 (icplusplus.c:27) 42 libtcl8.4.dylib 0x0a0319ec Tcl_ExprObj + 1056 (icplusplus.c:27) 43 libtcl8.4.dylib 0x0a010344 Tcl_ExprBooleanObj + 40 (icplusplus.c:27) 44 libtcl8.4.dylib 0x0a016a44 Tcl_IfObjCmd + 80 (icplusplus.c:27) 45 libtcl8.4.dylib 0x0a00ee58 TclEvalObjvInternal + 676 (icplusplus.c:27) 46 libtcl8.4.dylib 0x0a00f6e8 Tcl_EvalEx + 372 (icplusplus.c:27) 47 libtcl8.4.dylib 0x0a00fa2c Tcl_Eval + 32 (icplusplus.c:27) 48 libtcl8.4.dylib 0x0a011008 Tcl_GlobalEval + 36 (icplusplus.c:27) 49 libtk8.4.dylib 0x0b00445c Tk_BindEvent + 1644 (icplusplus.c:27) 50 libtk8.4.dylib 0x0b009f94 TkBindEventProc + 380 (icplusplus.c:27) 51 libtk8.4.dylib 0x0b011ef4 Tk_HandleEvent + 1832 (icplusplus.c:27) 52 libtk8.4.dylib 0x0b0124c4 WindowEventProc + 140 (icplusplus.c:27) 53 libtcl8.4.dylib 0x0a056ff4 Tcl_ServiceEvent + 144 (icplusplus.c:27) 54 libtcl8.4.dylib 0x0a0572dc Tcl_DoOneEvent + 156 (icplusplus.c:27) 55 _tkinter.so 0x0179b1a4 Tkapp_MainLoop + 436 (_tkinter.c:2537) 56 python2.4 0x0008d3c8 call_function + 948 (ceval.c:3558) 57 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 58 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 59 python2.4 0x0008d6ac fast_function + 360 (ceval.c:3651) 60 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 61 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 62 python2.4 0x0008d618 fast_function + 212 (ceval.c:3642) 63 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 64 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 65 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 66 python2.4 0x0008d6ac fast_function + 360 (ceval.c:3651) 67 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 68 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 69 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 70 python2.4 0x0008f480 PyEval_EvalCode + 48 (ceval.c:484) 71 python2.4 0x0000cc04 run_node + 76 (pythonrun.c:1266) 72 python2.4 0x0000c360 PyRun_SimpleFileExFlags + 604 (pythonrun.c:863) 73 python2.4 0x000067a0 Py_Main + 2708 (main.c:484) 74 python2.4 0x00002150 _start + 380 (crt.c:267) 75 python2.4 0x00001fd0 start + 48 Thread 1: 0 libSystem.B.dylib 0x90053f68 semaphore_timedwait_signal_trap + 8 1 libSystem.B.dylib 0x90053dc8 pthread_cond_timedwait + 672 2 libomnithread.3.dylib 0x0325432c omni_condition::timedwait(unsigned long, unsigned long) + 56 (icplusplus.c:27) 3 _omnipymodule.so 0x0307cf38 omnipyThreadScavenger::run_undetached(void*) + 228 4 libomnithread.3.dylib 0x03254958 omni_thread_wrapper + 208 (icplusplus.c:27) 5 libSystem.B.dylib 0x9002b200 _pthread_body + 96 Thread 2: 0 libSystem.B.dylib 0x9001f20c select + 12 1 libomniORB4.0.dylib 0x03126c50 omni::SocketCollection::Select() + 352 (icplusplus.c:27) 2 libomniORB4.0.dylib 0x031448a8 omni::tcpEndpoint::AcceptAndMonitor(void (*)(void*, omni::giopConnection*), void*) + 124 (icplusplus.c:27) 3 libomniORB4.0.dylib 0x03115788 omni::giopRendezvouser::execute() + 196 (icplusplus.c:27) 4 libomniORB4.0.dylib 0x03186b64 omniAsyncWorker::real_run() + 528 (icplusplus.c:27) 5 libomniORB4.0.dylib 0x03186940 omniAsyncWorker::run(void*) + 68 (icplusplus.c:27) 6 libomnithread.3.dylib 0x03254938 omni_thread_wrapper + 176 (icplusplus.c:27) 7 libSystem.B.dylib 0x9002b200 _pthread_body + 96 Thread 3: 0 libSystem.B.dylib 0x90053f68 semaphore_timedwait_signal_trap + 8 1 libSystem.B.dylib 0x90053dc8 pthread_cond_timedwait + 672 2 libomnithread.3.dylib 0x0325432c omni_condition::timedwait(unsigned long, unsigned long) + 56 (icplusplus.c:27) 3 libomniORB4.0.dylib 0x0310fa34 omni::Scavenger::execute() + 180 (icplusplus.c:27) 4 libomniORB4.0.dylib 0x03186b64 omniAsyncWorker::real_run() + 528 (icplusplus.c:27) 5 libomniORB4.0.dylib 0x03186940 omniAsyncWorker::run(void*) + 68 (icplusplus.c:27) 6 libomnithread.3.dylib 0x03254938 omni_thread_wrapper + 176 (icplusplus.c:27) 7 libSystem.B.dylib 0x9002b200 _pthread_body + 96 Thread 4: 0 libSystem.B.dylib 0x90023420 recvfrom + 12 1 libomniORB4.0.dylib 0x03143470 omni::tcpConnection::Recv(void*, unsigned long, unsigned long, unsigned long) + 304 (icplusplus.c:27) 2 libomniORB4.0.dylib 0x031116b4 omni::giopStream::inputMessage() + 336 (icplusplus.c:27) 3 libomniORB4.0.dylib 0x03120150 omni::giopImpl12::inputNewServerMessage(omni::giopStream*) + 72 (icplusplus.c:27) 4 libomniORB4.0.dylib 0x03120704 omni::giopImpl12::inputMessageBegin(omni::giopStream*, void (*)(omni::giopStream*)) + 208 (icplusplus.c:27) 5 libomniORB4.0.dylib 0x03116f04 omni::GIOP_S::dispatcher() + 100 (icplusplus.c:27) 6 libomniORB4.0.dylib 0x03115648 omni::giopWorker::real_execute() + 1472 (icplusplus.c:27) 7 libomniORB4.0.dylib 0x03115074 omni::giopWorker::execute() + 68 (icplusplus.c:27) 8 libomniORB4.0.dylib 0x03186b64 omniAsyncWorker::real_run() + 528 (icplusplus.c:27) 9 libomniORB4.0.dylib 0x03186940 omniAsyncWorker::run(void*) + 68 (icplusplus.c:27) 10 libomnithread.3.dylib 0x03254938 omni_thread_wrapper + 176 (icplusplus.c:27) 11 libSystem.B.dylib 0x9002b200 _pthread_body + 96 Thread 0 crashed with PPC Thread State 64: srr0: 0x000000000314b1d8 srr1: 0x000000000200f030 vrsave: 0x0000000000000000 cr: 0x84002242 xer: 0x0000000020000004 lr: 0x000000000314b1cc ctr: 0x00000000913aff58 r0: 0x000000000314b1cc r1: 0x00000000bfffba00 r2: 0x00000000a0001fa8 r3: 0x000000007fffdead r4: 0x000000007fffdead r5: 0x00000000bfffbab0 r6: 0x00000000432b2b00 r7: 0x0000000000697e80 r8: 0x00000000bfffc150 r9: 0x0000000000000008 r10: 0x00000000ffeaf704 r11: 0x000000000319acb0 r12: 0x00000000913aff58 r13: 0x00000000000f8ba0 r14: 0x0000000003291570 r15: 0x0000000000000000 r16: 0x0000000000000000 r17: 0x0000000000000000 r18: 0x000000007fffdead r19: 0x0000000000000000 r20: 0x0000000000000002 r21: 0x0000000000600160 r22: 0x00000000032e5970 r23: 0x0000000000000001 r24: 0x00000000bfffc150 r25: 0x0000000000697e50 r26: 0x00000000474e5543 r27: 0x00000000bfffbab0 r28: 0x0000000000697e80 r29: 0x00000000bfffc150 r30: 0x000000007fffdead r31: 0x0000000003085040 Binary Images Description: 0x1000 - 0xedfff python2.4 /Applications/Chimera.app/Contents/Resources/bin/python2.4 0x3d6000 - 0x3d6fff _chimera.so /Applications/Chimera.app/Contents/Resources/lib/_chimera.so 0x3d9000 - 0x3dbfff libtr.dylib /Applications/Chimera.app/Contents/Resources/lib/libtr.dylib 0x3e6000 - 0x3e7fff math.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/math.so 0x545000 - 0x576fff libwrappy2.dylib /Applications/Chimera.app/Contents/Resources/lib/libwrappy2.dylib 0x5a5000 - 0x5acfff libtogl.dylib /Applications/Chimera.app/Contents/Resources/lib/libtogl.dylib 0x5ce000 - 0x5d1fff strop.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/strop.so 0x5e3000 - 0x5e4fff MacOS.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/MacOS.so 0x705000 - 0x7a6fff libotf.dylib /Applications/Chimera.app/Contents/Resources/lib/libotf.dylib 0x1008000 - 0x1207fff _chimera.dylib /Applications/Chimera.app/Contents/Resources/lib/_chimera.dylib 0x138e000 - 0x13a1fff libftgl.dylib /Applications/Chimera.app/Contents/Resources/lib/libftgl.dylib 0x1466000 - 0x14a7fff libfreetype.6.dylib /Applications/Chimera.app/Contents/Resources/lib/libfreetype.6.dylib 0x1604000 - 0x1652fff libz.dylib /Applications/Chimera.app/Contents/Resources/lib/libz.dylib 0x1694000 - 0x16fffff _vrml.so /Applications/Chimera.app/Contents/Resources/lib/_vrml.so 0x1796000 - 0x179efff _tkinter.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/_tkinter.so 0x2048000 - 0x204afff operator.so 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/Applications/Chimera.app/Contents/Resources/lib/python2.4/site-packages/PIL/_imagingtk.so 0x22c1000 - 0x22c3fff _ssl.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/_ssl.so 0x235a000 - 0x2361fff _socket.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/_socket.so 0x237c000 - 0x237efff time.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/time.so 0x2458000 - 0x248bfff libtix8.2.dylib /Applications/Chimera.app/Contents/Resources/lib/libtix8.2.dylib 0x265c000 - 0x2675fff GLDriver /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLDriver.bundle/GLDriver 0x267b000 - 0x2696fff GLRendererFloat /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLRendererFloat.bundle/GLRendererFloat 0x2805000 - 0x2914fff GLEngine /System/Library/Frameworks/OpenGL.framework/Resources/GLEngine.bundle/GLEngine 0x2943000 - 0x2b9afff com.apple.ATIRadeon8500GLDriver 1.4.16 (4.1.6) /System/Library/Extensions/ATIRadeon8500GLDriver.bundle/Contents/MacOS/ATIRadeon8500GLDriver 0x2c45000 - 0x2c49fff _AE.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/_AE.so 0x2c6b000 - 0x2c6dfff _Evt.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/_Evt.so 0x2c8b000 - 0x2c8efff struct.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/struct.so 0x2cac000 - 0x2cb4fff _File.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/_File.so 0x2d69000 - 0x2d98fff _collaboratory.so /Applications/Chimera.app/Contents/Resources/lib/_collaboratory.so 0x2f5e000 - 0x2f63fff _Res.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/_Res.so 0x3030000 - 0x3031fff termios.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/termios.so 0x303e000 - 0x3040fff collections.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib-dynload/collections.so 0x3050000 - 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/System/Library/Frameworks/ApplicationServices.framework/Versions/A/ApplicationServices 0x914a9000 - 0x914e1fff com.apple.AE 1.5 (297) /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/AE.framework/Versions/A/AE 0x914fc000 - 0x915c9fff com.apple.ColorSync 4.4.3 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ColorSync.framework/Versions/A/ColorSync 0x9161e000 - 0x916b1fff com.apple.print.framework.PrintCore 4.3 (172.3) /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/PrintCore.framework/Versions/A/PrintCore 0x916f8000 - 0x917b5fff com.apple.QD 3.8.18 (???) /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/QD.framework/Versions/A/QD 0x917f3000 - 0x91851fff com.apple.HIServices 1.5.1 (???) /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/HIServices.framework/Versions/A/HIServices 0x9187f000 - 0x918a3fff com.apple.LangAnalysis 1.6.1 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/LangAnalysis.framework/Versions/A/LangAnalysis 0x918b7000 - 0x918dcfff com.apple.FindByContent 1.5 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/FindByContent.framework/Versions/A/FindByContent 0x918ef000 - 0x91931fff com.apple.LaunchServices 10.4.5 (168) /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/LaunchServices.framework/Versions/A/LaunchServices 0x9194d000 - 0x91961fff com.apple.speech.synthesis.framework 3.3 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/SpeechSynthesis.framework/Versions/A/SpeechSynthesis 0x9196f000 - 0x919a8fff com.apple.ImageIO.framework 1.4.3 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/ImageIO 0x919bd000 - 0x91a83fff libcrypto.0.9.7.dylib /usr/lib/libcrypto.0.9.7.dylib 0x91ad0000 - 0x91ae5fff libcups.2.dylib /usr/lib/libcups.2.dylib 0x91aea000 - 0x91b06fff libJPEG.dylib /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libJPEG.dylib 0x91b0b000 - 0x91b7afff libJP2.dylib /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libJP2.dylib 0x91b91000 - 0x91b95fff libGIF.dylib /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libGIF.dylib 0x91b97000 - 0x91bc8fff libRaw.dylib /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libRaw.dylib 0x91bcc000 - 0x91c0ffff libTIFF.dylib /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libTIFF.dylib 0x91c16000 - 0x91c2ffff libPng.dylib /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libPng.dylib 0x91c34000 - 0x91c37fff libRadiance.dylib /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libRadiance.dylib 0x91c39000 - 0x91c39fff com.apple.Accelerate 1.1.1 (Accelerate 1.1.1) /System/Library/Frameworks/Accelerate.framework/Versions/A/Accelerate 0x91c3b000 - 0x91d25fff com.apple.vImage 2.0 /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/vImage 0x91d2d000 - 0x91d4cfff com.apple.Accelerate.vecLib 3.1.1 (vecLib 3.1.1) /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/vecLib 0x91db8000 - 0x91e1dfff libvMisc.dylib /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvMisc.dylib 0x91e27000 - 0x91eb9fff libvDSP.dylib /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvDSP.dylib 0x91ed3000 - 0x92463fff libBLAS.dylib /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib 0x924ab000 - 0x927bbfff libLAPACK.dylib /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib 0x927e8000 - 0x92874fff com.apple.DesktopServices 1.3.1 /System/Library/PrivateFrameworks/DesktopServicesPriv.framework/Versions/A/DesktopServicesPriv 0x928b6000 - 0x92ae0fff com.apple.Foundation 6.4.2 (567.21) /System/Library/Frameworks/Foundation.framework/Versions/C/Foundation 0x92bfe000 - 0x92cdcfff libxml2.2.dylib /usr/lib/libxml2.2.dylib 0x92cfc000 - 0x92deafff libiconv.2.dylib /usr/lib/libiconv.2.dylib 0x92dfc000 - 0x92e1afff libGL.dylib /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib 0x92e25000 - 0x92e7ffff libGLU.dylib /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib 0x92e9d000 - 0x92e9dfff com.apple.Carbon 10.4 (???) /System/Library/Frameworks/Carbon.framework/Versions/A/Carbon 0x92e9f000 - 0x92eb3fff com.apple.ImageCapture 3.0 /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/ImageCapture.framework/Versions/A/ImageCapture 0x92ecb000 - 0x92edbfff com.apple.speech.recognition.framework 3.4 /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SpeechRecognition.framework/Versions/A/SpeechRecognition 0x92ee7000 - 0x92efcfff com.apple.securityhi 2.0 (203) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SecurityHI.framework/Versions/A/SecurityHI 0x92f0e000 - 0x92f95fff com.apple.ink.framework 101.2 (69) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Ink.framework/Versions/A/Ink 0x92fa9000 - 0x92fb4fff com.apple.help 1.0.3 (32) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Help.framework/Versions/A/Help 0x92fbe000 - 0x92febfff com.apple.openscripting 1.2.3 (???) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/OpenScripting.framework/Versions/A/OpenScripting 0x93005000 - 0x93015fff com.apple.print.framework.Print 5.0 (190.1) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Print.framework/Versions/A/Print 0x93021000 - 0x93087fff com.apple.htmlrendering 1.1.2 /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HTMLRendering.framework/Versions/A/HTMLRendering 0x930b8000 - 0x9310afff com.apple.NavigationServices 3.4.2 /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/NavigationServices.framework/Versions/A/NavigationServices 0x93136000 - 0x93153fff com.apple.audio.SoundManager 3.9 /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/CarbonSound.framework/Versions/A/CarbonSound 0x93165000 - 0x93172fff com.apple.CommonPanels 1.2.2 (73) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/CommonPanels.framework/Versions/A/CommonPanels 0x9317b000 - 0x9348dfff com.apple.HIToolbox 1.4.4 (???) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HIToolbox.framework/Versions/A/HIToolbox 0x935d9000 - 0x935e5fff com.apple.opengl 1.4.6 /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL 0x94407000 - 0x94457fff libGLImage.dylib /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib 0x94ce0000 - 0x94d0efff libssl.0.9.7.dylib /usr/lib/libssl.0.9.7.dylib 0x97afa000 - 0x97bbbfff libGLProgrammability.dylib /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLProgrammability.dylib 0x97be6000 - 0x97be7fff libGLSystem.dylib /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLSystem.dylib 0x9b0a0000 - 0x9b0affff libICE.6.dylib /usr/X11R6/lib/libICE.6.dylib 0x9b0b5000 - 0x9b0bafff libSM.6.dylib /usr/X11R6/lib/libSM.6.dylib 0x9b1cb000 - 0x9b1d9fff libXplugin.1.dylib /usr/lib/libXplugin.1.dylib 0x9c1be000 - 0x9c1c9fff libXext.6.dylib /usr/X11R6/lib/libXext.6.dylib 0x9c1ce000 - 0x9c296fff libX11.6.2.dylib /usr/X11R6/lib/libX11.6.2.dylib 0x9c2bd000 - 0x9c337fff libGL.1.2.dylib /usr/X11R6/lib/libGL.1.2.dylib 0x9c366000 - 0x9c3c8fff libGLU.1.3.dylib /usr/X11R6/lib/libGLU.1.3.dylib 0x9c55e000 - 0x9c5a0fff libXt.6.0.dylib /usr/X11R6/lib/libXt.6.0.dylib 0x9c5ef000 - 0x9c5fffff libXmu.6.2.dylib /usr/X11R6/lib/libXmu.6.2.dylib Model: PowerBook3,5, BootROM 4.5.3f2, 1 processors, PowerPC G4 (3.2), 1 GHz, 1 GB Graphics: ATY,RV250M9, ATY,RV250M9, AGP, 64 MB Memory Module: SODIMM0/J16TOP, 512 MB, SDRAM, PC133U-333 Memory Module: SODIMM1/J16BOTTOM, 512 MB, SDRAM, PC133U-333 AirPort: AirPort, 9.52 Modem: MicroDash, UCJ, V.92, 1.0F, APPLE VERSION 2.6.6 Network Service: Built-in Ethernet, Ethernet, en0 Network Service: AirPort, AirPort, en1 PCI Card: TXN,PCI1410-02, cardbus, PC Card Parallel ATA Device: HTE726060M9AT00, 55.89 GB Parallel ATA Device: MATSHITADVD-R UJ-815, USB Device: USB2.0 Hub, , Up to 12 Mb/sec, 500 mA USB Device: Hub in Apple Pro Keyboard, Mitsumi Electric, Up to 12 Mb/sec, 500 mA USB Device: Apple Pro Keyboard, Mitsumi Electric, Up to 12 Mb/sec, 250 mA USB Device: USB-PS/2 Optical Mouse, Logitech, Up to 1.5 Mb/sec, 500 mA USB Device: Creative Zen Micro, Creative Technology Ltd, Up to 12 Mb/sec, 500 mA FireWire Device: unknown_device, unknown_value, Up to 400 Mb/sec -- Xavier Deupi, Ph.D. Department of Molecular and Cellular Physiology Beckman Center for Molecular and Genetic Medicine (B161) 279 Campus Drive, Stanford University School of Medicine Stanford, CA 94305 (USA) E-mail: Xavier.Deupi@stanford.edu Phone: +1 (650) 725-6497 Fax : +1 (650) 725-8021
Hi Xavier, I am going to enter your report in our bug database and Greg (in charge of the collaboratory) will get back to you about it. --Eric On Nov 21, 2005, at 2:10 PM, Xavier Deupi wrote:
Hi,
In the workshop last week I asked some of you about the collaboratory tool. Well, I'm making some tests and, so far, it has more or less worked between two computers in our lab. Now I want to try 'outside' the university firewall.
But during the tests, Chimera has crashed a couple of times when I was joining the session I had just started. I include the error report generated by my computer (a PowerBook G4). I don't think I made anything different the times it has worked than the times the program crashed. Hope the error report makes some sense to you.
Thanks,
xavi
***********************************************
Date/Time: 2005-11-21 13:59:03.443 -0800 OS Version: 10.4.3 (Build 8F46) Report Version: 3
Command: python2.4 Path: /Applications/Chimera.app/Contents/Resources/bin/python2.4 Parent: WindowServer [48]
Version: 1.2184 (1.2184)
PID: 854 Thread: 0
Exception: EXC_BAD_ACCESS (0x0001) Codes: KERN_INVALID_ADDRESS (0x0001) at 0x7fffdead
Thread 0 Crashed: 0 libomniORB4.0.dylib 0x0314b1d8 parse_lsda_header(_Unwind_Context*, unsigned char const*, lsda_header_info*) + 48 (icplusplus.c:27) 1 libomniORB4.0.dylib 0x0314b494 __gxx_personality_v0 + 164 (icplusplus.c:27) 2 _omnipymodule.so 0x030850ac _Unwind_RaiseException_Phase2 + 124 3 _omnipymodule.so 0x03085420 _Unwind_Resume + 104 4 _omnipymodule.so 0x0305c764 omniPy::Py_omniCallDescriptor::userException(cdrStream&, omni::IOP_C*, char const*) + 284 5 libomniORB4.0.dylib 0x031021e4 omniRemoteIdentity::dispatch(omniCallDescriptor&) + 492 (icplusplus.c:27) 6 libomniORB4.0.dylib 0x030e981c omniObjRef::_invoke(omniCallDescriptor&, bool) + 500 (icplusplus.c:27) 7 _omnipymodule.so 0x03052918 omnipy_invoke + 376 8 python2.4 0x0008d3c8 call_function + 948 (ceval.c:3558) 9 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 10 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 11 python2.4 0x0008d6ac fast_function + 360 (ceval.c:3651) 12 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 13 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 14 python2.4 0x0008d618 fast_function + 212 (ceval.c:3642) 15 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 16 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 17 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 18 python2.4 0x0008d6ac fast_function + 360 (ceval.c:3651) 19 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 20 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 21 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 22 python2.4 0x0008d6ac fast_function + 360 (ceval.c:3651) 23 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 24 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 25 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 26 python2.4 0x000b84f4 function_call + 344 (funcobject.c:548) 27 python2.4 0x0001c2a0 PyObject_Call + 48 (abstract.c:1757) 28 python2.4 0x0008cfd0 PyEval_CallObjectWithKeywords + 256 (ceval.c:3426) 29 python2.4 0x000a48dc builtin_apply + 352 (bltinmodule.c:100) 30 python2.4 0x0008d3c8 call_function + 948 (ceval.c:3558) 31 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 32 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 33 python2.4 0x000b84f4 function_call + 344 (funcobject.c:548) 34 python2.4 0x0001c2a0 PyObject_Call + 48 (abstract.c:1757) 35 python2.4 0x000869a8 instancemethod_call + 788 (classobject.c:2448) 36 python2.4 0x0001c2a0 PyObject_Call + 48 (abstract.c:1757) 37 python2.4 0x0008cfd0 PyEval_CallObjectWithKeywords + 256 (ceval.c:3426) 38 _tkinter.so 0x0179ccb0 PythonCmd + 368 (_tkinter.c:1999) 39 libtcl8.4.dylib 0x0a00dc94 TclInvokeStringCommand + 148 (icplusplus.c:27) 40 libtcl8.4.dylib 0x0a00ee58 TclEvalObjvInternal + 676 (icplusplus.c:27) 41 libtcl8.4.dylib 0x0a0326ec TclExecuteByteCode + 2536 (icplusplus.c:27) 42 libtcl8.4.dylib 0x0a0319ec Tcl_ExprObj + 1056 (icplusplus.c:27) 43 libtcl8.4.dylib 0x0a010344 Tcl_ExprBooleanObj + 40 (icplusplus.c:27) 44 libtcl8.4.dylib 0x0a016a44 Tcl_IfObjCmd + 80 (icplusplus.c:27) 45 libtcl8.4.dylib 0x0a00ee58 TclEvalObjvInternal + 676 (icplusplus.c:27) 46 libtcl8.4.dylib 0x0a00f6e8 Tcl_EvalEx + 372 (icplusplus.c:27) 47 libtcl8.4.dylib 0x0a00fa2c Tcl_Eval + 32 (icplusplus.c:27) 48 libtcl8.4.dylib 0x0a011008 Tcl_GlobalEval + 36 (icplusplus.c:27) 49 libtk8.4.dylib 0x0b00445c Tk_BindEvent + 1644 (icplusplus.c:27) 50 libtk8.4.dylib 0x0b009f94 TkBindEventProc + 380 (icplusplus.c:27) 51 libtk8.4.dylib 0x0b011ef4 Tk_HandleEvent + 1832 (icplusplus.c:27) 52 libtk8.4.dylib 0x0b0124c4 WindowEventProc + 140 (icplusplus.c:27) 53 libtcl8.4.dylib 0x0a056ff4 Tcl_ServiceEvent + 144 (icplusplus.c:27) 54 libtcl8.4.dylib 0x0a0572dc Tcl_DoOneEvent + 156 (icplusplus.c:27) 55 _tkinter.so 0x0179b1a4 Tkapp_MainLoop + 436 (_tkinter.c:2537) 56 python2.4 0x0008d3c8 call_function + 948 (ceval.c:3558) 57 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 58 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 59 python2.4 0x0008d6ac fast_function + 360 (ceval.c:3651) 60 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 61 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 62 python2.4 0x0008d618 fast_function + 212 (ceval.c:3642) 63 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 64 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 65 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 66 python2.4 0x0008d6ac fast_function + 360 (ceval.c:3651) 67 python2.4 0x0008d4a0 call_function + 1164 (ceval.c:3579) 68 python2.4 0x0008ae28 PyEval_EvalFrame + 8852 (ceval.c:2165) 69 python2.4 0x0008bfe0 PyEval_EvalCodeEx + 2156 (ceval.c:2736) 70 python2.4 0x0008f480 PyEval_EvalCode + 48 (ceval.c:484) 71 python2.4 0x0000cc04 run_node + 76 (pythonrun.c: 1266) 72 python2.4 0x0000c360 PyRun_SimpleFileExFlags + 604 (pythonrun.c:863) 73 python2.4 0x000067a0 Py_Main + 2708 (main.c:484) 74 python2.4 0x00002150 _start + 380 (crt.c:267) 75 python2.4 0x00001fd0 start + 48
Thread 1: 0 libSystem.B.dylib 0x90053f68 semaphore_timedwait_signal_trap + 8 1 libSystem.B.dylib 0x90053dc8 pthread_cond_timedwait + 672 2 libomnithread.3.dylib 0x0325432c omni_condition::timedwait(unsigned long, unsigned long) + 56 (icplusplus.c:27) 3 _omnipymodule.so 0x0307cf38 omnipyThreadScavenger::run_undetached(void*) + 228 4 libomnithread.3.dylib 0x03254958 omni_thread_wrapper + 208 (icplusplus.c:27) 5 libSystem.B.dylib 0x9002b200 _pthread_body + 96
Thread 2: 0 libSystem.B.dylib 0x9001f20c select + 12 1 libomniORB4.0.dylib 0x03126c50 omni::SocketCollection::Select() + 352 (icplusplus.c:27) 2 libomniORB4.0.dylib 0x031448a8 omni::tcpEndpoint::AcceptAndMonitor(void (*)(void*, omni::giopConnection*), void*) + 124 (icplusplus.c:27) 3 libomniORB4.0.dylib 0x03115788 omni::giopRendezvouser::execute() + 196 (icplusplus.c:27) 4 libomniORB4.0.dylib 0x03186b64 omniAsyncWorker::real_run() + 528 (icplusplus.c:27) 5 libomniORB4.0.dylib 0x03186940 omniAsyncWorker::run(void*) + 68 (icplusplus.c:27) 6 libomnithread.3.dylib 0x03254938 omni_thread_wrapper + 176 (icplusplus.c:27) 7 libSystem.B.dylib 0x9002b200 _pthread_body + 96
Thread 3: 0 libSystem.B.dylib 0x90053f68 semaphore_timedwait_signal_trap + 8 1 libSystem.B.dylib 0x90053dc8 pthread_cond_timedwait + 672 2 libomnithread.3.dylib 0x0325432c omni_condition::timedwait(unsigned long, unsigned long) + 56 (icplusplus.c:27) 3 libomniORB4.0.dylib 0x0310fa34 omni::Scavenger::execute() + 180 (icplusplus.c:27) 4 libomniORB4.0.dylib 0x03186b64 omniAsyncWorker::real_run() + 528 (icplusplus.c:27) 5 libomniORB4.0.dylib 0x03186940 omniAsyncWorker::run(void*) + 68 (icplusplus.c:27) 6 libomnithread.3.dylib 0x03254938 omni_thread_wrapper + 176 (icplusplus.c:27) 7 libSystem.B.dylib 0x9002b200 _pthread_body + 96
Thread 4: 0 libSystem.B.dylib 0x90023420 recvfrom + 12 1 libomniORB4.0.dylib 0x03143470 omni::tcpConnection::Recv(void*, unsigned long, unsigned long, unsigned long) + 304 (icplusplus.c:27) 2 libomniORB4.0.dylib 0x031116b4 omni::giopStream::inputMessage() + 336 (icplusplus.c:27) 3 libomniORB4.0.dylib 0x03120150 omni::giopImpl12::inputNewServerMessage(omni::giopStream*) + 72 (icplusplus.c:27) 4 libomniORB4.0.dylib 0x03120704 omni::giopImpl12::inputMessageBegin(omni::giopStream*, void (*)(omni::giopStream*)) + 208 (icplusplus.c:27) 5 libomniORB4.0.dylib 0x03116f04 omni::GIOP_S::dispatcher() + 100 (icplusplus.c:27) 6 libomniORB4.0.dylib 0x03115648 omni::giopWorker::real_execute() + 1472 (icplusplus.c:27) 7 libomniORB4.0.dylib 0x03115074 omni::giopWorker::execute() + 68 (icplusplus.c:27) 8 libomniORB4.0.dylib 0x03186b64 omniAsyncWorker::real_run() + 528 (icplusplus.c:27) 9 libomniORB4.0.dylib 0x03186940 omniAsyncWorker::run(void*) + 68 (icplusplus.c:27) 10 libomnithread.3.dylib 0x03254938 omni_thread_wrapper + 176 (icplusplus.c:27) 11 libSystem.B.dylib 0x9002b200 _pthread_body + 96
Thread 0 crashed with PPC Thread State 64: srr0: 0x000000000314b1d8 srr1: 0x000000000200f030 vrsave: 0x0000000000000000 cr: 0x84002242 xer: 0x0000000020000004 lr: 0x000000000314b1cc ctr: 0x00000000913aff58 r0: 0x000000000314b1cc r1: 0x00000000bfffba00 r2: 0x00000000a0001fa8 r3: 0x000000007fffdead r4: 0x000000007fffdead r5: 0x00000000bfffbab0 r6: 0x00000000432b2b00 r7: 0x0000000000697e80 r8: 0x00000000bfffc150 r9: 0x0000000000000008 r10: 0x00000000ffeaf704 r11: 0x000000000319acb0 r12: 0x00000000913aff58 r13: 0x00000000000f8ba0 r14: 0x0000000003291570 r15: 0x0000000000000000 r16: 0x0000000000000000 r17: 0x0000000000000000 r18: 0x000000007fffdead r19: 0x0000000000000000 r20: 0x0000000000000002 r21: 0x0000000000600160 r22: 0x00000000032e5970 r23: 0x0000000000000001 r24: 0x00000000bfffc150 r25: 0x0000000000697e50 r26: 0x00000000474e5543 r27: 0x00000000bfffbab0 r28: 0x0000000000697e80 r29: 0x00000000bfffc150 r30: 0x000000007fffdead r31: 0x0000000003085040
Binary Images Description: 0x1000 - 0xedfff python2.4 /Applications/Chimera.app/Contents/Resources/bin/python2.4 0x3d6000 - 0x3d6fff _chimera.so /Applications/Chimera.app/Contents/Resources/lib/_chimera.so 0x3d9000 - 0x3dbfff libtr.dylib /Applications/Chimera.app/Contents/Resources/lib/libtr.dylib 0x3e6000 - 0x3e7fff math.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib- dynload/math.so 0x545000 - 0x576fff libwrappy2.dylib /Applications/Chimera.app/Contents/Resources/lib/libwrappy2.dylib 0x5a5000 - 0x5acfff libtogl.dylib /Applications/Chimera.app/Contents/Resources/lib/libtogl.dylib 0x5ce000 - 0x5d1fff strop.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib- dynload/strop.so 0x5e3000 - 0x5e4fff MacOS.so /Applications/Chimera.app/Contents/Resources/lib/python2.4/lib- dynload/MacOS.so 0x705000 - 0x7a6fff libotf.dylib /Applications/Chimera.app/Contents/Resources/lib/libotf.dylib 0x1008000 - 0x1207fff _chimera.dylib /Applications/Chimera.app/Contents/Resources/lib/_chimera.dylib 0x138e000 - 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Model: PowerBook3,5, BootROM 4.5.3f2, 1 processors, PowerPC G4 (3.2), 1 GHz, 1 GB Graphics: ATY,RV250M9, ATY,RV250M9, AGP, 64 MB Memory Module: SODIMM0/J16TOP, 512 MB, SDRAM, PC133U-333 Memory Module: SODIMM1/J16BOTTOM, 512 MB, SDRAM, PC133U-333 AirPort: AirPort, 9.52 Modem: MicroDash, UCJ, V.92, 1.0F, APPLE VERSION 2.6.6 Network Service: Built-in Ethernet, Ethernet, en0 Network Service: AirPort, AirPort, en1 PCI Card: TXN,PCI1410-02, cardbus, PC Card Parallel ATA Device: HTE726060M9AT00, 55.89 GB Parallel ATA Device: MATSHITADVD-R UJ-815, USB Device: USB2.0 Hub, , Up to 12 Mb/sec, 500 mA USB Device: Hub in Apple Pro Keyboard, Mitsumi Electric, Up to 12 Mb/sec, 500 mA USB Device: Apple Pro Keyboard, Mitsumi Electric, Up to 12 Mb/sec, 250 mA USB Device: USB-PS/2 Optical Mouse, Logitech, Up to 1.5 Mb/sec, 500 mA USB Device: Creative Zen Micro, Creative Technology Ltd, Up to 12 Mb/sec, 500 mA FireWire Device: unknown_device, unknown_value, Up to 400 Mb/sec
-- Xavier Deupi, Ph.D. Department of Molecular and Cellular Physiology Beckman Center for Molecular and Genetic Medicine (B161) 279 Campus Drive, Stanford University School of Medicine Stanford, CA 94305 (USA)
E-mail: Xavier.Deupi@stanford.edu Phone: +1 (650) 725-6497 Fax : +1 (650) 725-8021
_______________________________________________ Chimera-dev mailing list Chimera-dev@cgl.ucsf.edu http://www.cgl.ucsf.edu/mailman/listinfo/chimera-dev
participants (2)
-
Eric Pettersen -
Xavier Deupi