Hi George, Oh, I see… each model is just a tube, but together they form fanlike structures, similar to output from the ViewMotions server: <http://viewmotions.bc.edu/> Thanks for sharing! Elaine
On Jun 6, 2016, at 1:13 PM, George Tzotzos <gtzotzos@me.com> wrote:
Hi Elaine,
Grateful for the prompt and useful response.
The flat ribbons come for a cluster of pdb files sampled from the first eigenvector of PCA. I’m attaching such a file.
Once again, many thanks
George <pc1.pdb>
On 6 Jun 2016, at 21:55, Elaine Meng <meng@cgl.ucsf.edu> wrote:
Hi George, I’m not really sure how you got those flat ribbons, but I think you can just use the transparency command. It takes a percentage transparency, so for 75% transparent, a command something like:
transp 75,r :1-10,124-125
… where the “,r” part does NOT have any space before it, and “r” stands for ribbons.
I hope this helps, Elaine