27 Apr
2010
27 Apr
'10
8:09 p.m.
As a minor point, I was unable to render helices transparent. Transparency would help to to see the centroid trajectory in between helices.
Eric described one way to make transparent ribbons. The "similar binding sites" tutorial gives examples of how to do it with commands: <http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/tutorials/convergent.html
and both ways were described in more detail in this previous post: <http://www.cgl.ucsf.edu/pipermail/chimera-users/2006-December/001155.html
Elaine ----- Elaine C. Meng, Ph.D. UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco