On Jun 7, 2012, at 1:12 PM, Marek Maly wrote:

If I load in Chimera system AB then delete in Chimera part B and save the rest (part A)
as the PDB file there still remain CONECT records which belongs to deleted atoms B

Hi Marek,
Can you provide an example for me where this occurs?  In my tests this did not happen, so I need some help reproducing this.

--Eric

                        Eric Pettersen

                        UCSF Computer Graphics Lab

                        http://www.cgl.ucsf.edu