Hello Anjali Setiya, You can save a Mol2 file containing only the selected atoms with the "write" command. For example, if your structure is model #0 and you want to write a mol2 file named residue30.mol2 to your Desktop: select :30 write selected format mol2 #0 ~/Desktop/residue30.mol2 See "write" command help including "selected" option: <https://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/write.html> I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Aug 26, 2022, at 4:31 AM, asetiya <asetiya@cdac.in> wrote:
Sir/Ma'am, I have query regarding chimera, through command line I want to select a particular residue and delete the remaining protein and save in the .mol2 file for further processing for my project.I used the following command to select the residue: select :30 for selecting the desired residue. Can you give me an insight as to how to delete the remaining protein and save in the .mol2 format. That will be very helpful.
Thanks & Regards Anjali Setiya