Dear Prof. Eric & other team member: First, thanks for your reply and help. As for the platform of my computer, here is the basic information: Ubuntu, Release 12.04 (precise) 64-bit Kernel Linux 3.2.0-24-generic GNOME 3.4.1 Intel® Core™ i7 CPU 860 @ 2.80GHz × 8 Memory:5.8G As for the shell, i usually use bash :) Please let me know how to change the MMTK_ENERGY_THREADS parameter? Sincerely thanks for your help. Lowie On Fri, Jun 15, 2012 at 1:51 AM, Eric Pettersen <pett@cgl.ucsf.edu> wrote:
Hi Lowie, You don't have to install MMTK yourself. It is bundled with Chimera. Also, as this post says:
[Chimera-users] Parallel run<http://plato.cgl.ucsf.edu/pipermail/chimera-users/2010-September/005499.html>
it depends on your platform and personal configuration. So, what platform do you use (Windows/Linux/Mac) and if it's Linux, what shell do you use?
--Eric
Eric Pettersen UCSF Computer Graphics Lab http://www.cgl.ucsf.edu
On Jun 14, 2012, at 6:56 AM, A-A_lowie li wrote:
Dear Sir:
I am a new user of Chimera, but immediately attracted by this handy software Chimera.
Since my model requires a lot of computation time in energy minimization, could you please how to set up the environment for parallel computation of energy minimization in Chimera?
On one website, it was said, MMTK ENERGY THREADS could be reset for parallel computation.
After installation of MMTK, I am confused on how to change parameter in MMTK, and recompile Chimera (or change Chimera settings ).
Could you please give me more details about how to set MMTK ENERGY THREADS in Chimera?
Sincerely thanks for your advice.
Lowie
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