Hi Juan,

  The Chimera Segger dialog menu entry Regions / Extract Densities let’s you make cube shaped maps for selected segmented regions.  I guess you were using Segger menu File / Save Selected Regions which does not give that option.

Tom


On Jan 18, 2015, at 7:55 AM, Juan Luis Loredo Varela <jlvl500@york.ac.uk> wrote:

Dear Chimera users

When I use the Segment map option to save a specific fragment as .mrc file, Chimera uses the minimal box containing the segment. Does anyone know how to modify the dimensions of a density map to have it in a cubic box that can be used in Flex-EM?

Thanks

Juan



--
Juan Luis Loredo Varela

PhD Student
Antson Group
York Structural Biology Laboratory L0
Department of Chemistry
University of York
_______________________________________________
Chimera-users mailing list
Chimera-users@cgl.ucsf.edu
http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users