Hi everyone,<div>For the purpose of making educational content, I&#39;m interested in smoothing out the often jumpy transitions from frame to frame in a MD trajectory. My approach was to write two python scripts (with critical help from Eric of course); one goes through the trajectory and saves pdbs of each desired frame, while the second opens these pdbs and creates a morph, interpolating from one pdb to the next. </div>
<div><br></div><div>It seemed like I was almost there, and it looked great when I tried 50 frames.....but Chimera crashed when I tried morphing 200 frames, adding 3 frames of interpolation between each. </div><div><br></div>
<div>Is there a better way to add transitions in between (ideally thousands of) frames of an MD trajectory?<br clear="all"><div><br></div><div>Thanks</div><div>Dan</div>-- <br>____________________________<br><br>Daniel Gurnon, Ph. D.<br>
Associate Professor of Chemistry and Biochemistry<br>DePauw University<br>Greencastle, IN 46135<br><br>p: 765-658-6279<br>e: <a href="mailto:danielgurnon@depauw.edu" target="_blank">danielgurnon@depauw.edu</a><br>
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