Hi,

am looking for an analysis tool in Chimera  that would write out - let's say a matrix for translation/rotation of a pdb-file in respect to another one.

Usage:  would like to align chain A and chain B present in a pdb-file and want to know which translation/rotation matrix has to be applied in order to convert  the non-aligned pdb-coordinates of chain B to the 'new" aligned pdb-coordinates.

Thanx for your help,
-Thomas



-------------------------------------------------------------------------------

Thomas C. Marlovits, PhD, M.A.S.

IMP-IMBA Research Center
- Research Institute of Molecular Pathology (IMP)
- Institute of Molecular Biotechnology, Austrian Academy of Sciences (IMBA)

Dr. Bohr-Gasse 3
Room IMBA/6.02
A-1030 Vienna
Austria, Europe

fone: (++43-1) 79044-4630
fax: (++43-1) 79044-4401