Re: [Chimera-users] Z-slice transparency

Hi Lu, You can make Chimera plane display opaque. The degree of transparency and brightness are given by the height of the yellow curve on the volume dialog histogram -- at the top of the histogram is completely opaque, and at the bottom is completely transparent. So make the yellow line be entirely at the top of the histogram and set the color of the low (noise) data value nodes in the yellow curve to black. The latest Chimera daily builds have the plane display feature built into the volume dialog. http://www.cgl.ucsf.edu/chimera/alpha-downloads.html Tom