Dear colleagues,

I want to symmetrise the monomer to get the complete model that has D7 symmetry.

I symmetrised the monomer getting the complete 14-homoligomeric model.

The issue is that the PDB validation report shows the presence of many clashes.

Do I understand correctly that if the symmetrisation goes correctly, the clashes are not present?

Did the symmetrisation go wrong due to the incorrectly measured symmetry centre?

What are the options to fix that?

Thank you for your opinion.

Kind regards,

Dmitry