Thanks for your reply Elaine. Have a nice weekend Arvind. ________________________________ From: Elaine Meng <meng@cgl.ucsf.edu> Sent: Friday, May 3, 2019 4:19:39 PM To: Arvind SHARMA Cc: Chimera User Help Subject: Re: [Chimera-users] RR distance map, scale normalization Hi Arvind, Unfortunately not, it is a limitation of RR distance maps. It is mentioned in the technical notes section at the bottom of the page, "Coloring is applied across the full value range.” <http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/rrdistmaps/rrdistm...> Sorry about that, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On May 3, 2019, at 12:11 AM, Arvind SHARMA <arvind.sharma@pasteur.fr> wrote:
Hi,
I am comparing four drug bound structures of homologous proteins to their unbound structures in chimera RR distance maps. These structures vary to different degree to unbound structures and I want to show that in four individual RR distance maps (each bound structure to unbound structure). The problem is that the scale varies each time and I was wondering if there is a way to normalize the scale? or set the color code so that, for e.g, for stdv of 10 its red in all cases and below 5 its always white.
Thanks. Best wishes, Arvind.