
1 Oct
2009
1 Oct
'09
8:08 a.m.
Hello, I am trying to compare a protein structure generated through molecular dynamics to a reference structure that is the starting pdb file. I was using MATCHMAKER. I get the rms value and the residue matches, but when I do this I don't get the overlaid reference and MD structure in the viewing window. Can someone tell me what I need to do to get the overlaid structures? Thanks! John