Hi David, It may be that you need to color-zone the morph map (not just the input maps), and there is an example in this previous post: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/2015-August/011343.html> See the first attachment, which is just a short Chimera command script (plain text) despite the mail-system changing its name to something.obj. The second attachment is the resulting movie. I hope this helps, Elaine ---------- Elaine C. Meng, Ph.D. UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco
On Sep 26, 2016, at 2:00 AM, Haselbach, David <david.haselbach@mpibpc.mpg.de> wrote:
Hi everyone,
Want to make a movie of a movement of a single domain in my complex through morphing through several cryo EM densities. However as it is very complex I wanted to color the domain of interest. I did so with color zone and got a nice result for all the intermediate states. However as soon as I start morphing the color is gone even though interpolate colors is on. Is there are trick to achieve that? I tried segmenting the map and then interpolating through the segmented maps which works in principle fine but I don’t really like the edge that is created by the segmentation.
Kind regards David