On Sep 15, 2006, at 1:21 PM, Elaine Meng wrote:

The programmers among my colleagues may be able to generate Python 

scripts that would be much less icky.


If you know enough of the basics of Python to write a loop, then as Elaine pointed out these color transitions become less onerous.  Also, you don't need to know the Python equivalent of every Chimera command you need, since you can:

from chimera import runCommand

to make the runCommand function available and then thereafter use it to execute a string with the command you want, e.g.:

runCommand("open 1gcn")

to open 1gcn.

--Eric

                        Eric Pettersen
                        UCSF Computer Graphics Lab
                        pett@cgl.ucsf.edu
                        http://www.cgl.ucsf.edu