
Dear professor Elaine Meng: I can not add a GGGGGGG sequence to the place between 182 and 183 residues by the Modeller interface for building loops. My structure is in a attachment file. Thanks for your help. best wishes Haiping zhang 在 2013-09-27 04:16:42,"Elaine Meng" <meng@cgl.ucsf.edu> 写道:
Dear Haiping Zhang, You can use the Modeller interface for building loops. First show the Sequence for that protein chain (menu: Tools… Sequence… Sequence). This sequence comes from the SEQRES in the PDB file and includes the whole sequence. The part that is missing from the structure is shown with a red outline box. To build the missing part, from the Sequence window menu choose Structure… Modeller (loops/refinement). The Modeller loop-building interface is described here:
<http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/multalignviewer/mo...>
I hope this helps, Elaine ---------- Elaine C. Meng, Ph.D. UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco
On Sep 26, 2013, at 2:59 AM, 张海平 <spr8249618@163.com> wrote:
Dear professor Elaine C. Meng: I have a structure that miss some resides, I want to add a loop to fed the gap. How can I accomplish this by chimera? The structure is as bellow, I want to add some residus to the place where shows dot line. Thanks for your help.
<截图1.png>