Hi Luca, Maybe “matrixcopy” to apply the transformation of one model to another, e.g. if map #3 with fit atoms #4 was matched onto some other map, then bring atoms along with: matrixcopy #3 #4 <http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/matrixcopy.html> The part I’m not sure about is whether the fit-atoms model #4 would need to be in the same coordinate system as #3 (previously saved relative to #3 and then read back in). I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Apr 20, 2018, at 7:17 AM, Luca Pellegrini <lp212@cam.ac.uk> wrote:
Hi,
I’d like to superimpose a cryoEM map with fitted atoms onto a second cryoEM map. I do this using ‘fit in map’, but only the map moves, the fitted structure does not. Is there a way to update the coordinates of the fitted structure according to the map superposition?
Best wishes, Luca