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Elaine Thank you for your usual prompt reply. Will try it. Thanks arthur -----Original Message----- From: Elaine Meng [mailto:meng@cgl.ucsf.edu] Sent: Friday, April 28, 2017 3:52 PM To: Arthur Szabo <agszabo@outlook.com> Cc: chimera-users@cgl.ucsf.edu BB <chimera-users@cgl.ucsf.edu> Subject: Re: [Chimera-users] assistance changing pseudobond appearance Hi Arthur, First Ctrl-click on the dashed line to select it. Then, click the green magnifying glass icon near the bottom right of the Chimera window to open the Selection Inspector. In the Inspector window (Inspect: Pseudobond): (1) change “halfbond mode” to “off”, otherwise it will get colored by the atoms instead of having its own color (2) click or doubleclick the square color thing to make the Color Editor window appear, in which you can change the color To make the dashed line fatter, stay in the Inspector tool but now use pulldown menu to Inspect: Pseudobond group (instead of just Inspect: Pseudobond), then: change “line width” to some bigger number I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco
On Apr 28, 2017, at 12:16 PM, Arthur Szabo <agszabo@outlook.com> wrote:
I asked this question several months ago, but rarely have applied the answer. I have a structure that has a long stretch that is disordered. In the structure it appears as a dashed line. If I highlight this section of the total sequence and then apply a color (red) the whole structure is then colored red.
So how can I make the dashes slightly larger, and secondly color that stretch of dashes with a particular color without coloring the rest of the molecule? Thank you Arthur G. Szabo