Dear Users,
I am trying to use hbond command in the movie tool of Chimera 1.8. I want to repeat hbond analyses with different criteria simultaneously in a single script
these are my commands
select :9@O1P,O2P,O3P,N,H :12@N,H
findhbond selRestrictboth linewidth 2 color green reveal true (..I want to monitor hydrogen bond between these two residues with default criteria)
~sel
select :3@O1P,O2P,O3P :6@O1P,O2P
findhbond selRestrict any color black reveal true relax true distSlop 2.7 intraRes false
~sel
When I tried these commands in one single script, I could see hydrogen bonds displayed for residue 3 and 6 and not between residues 9 and 12.
Hopefully you can correct me. Your help is appreciated
--
Regards,
Dr. Neha S. Gandhi,
Curtin Research Fellow,
School of Biomedical Sciences,
Curtin University,
Perth GPO U1987
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