Hi Eric:

If I did correctly, it does not work.

Attached is a pdb file from work that I recently published. If relevant, I could also provide psf/dcd. In fact, my main interest is in describing the MD trajectory with chimera/centroid, while highlighting in different colors the various chains and residues of particular interest

Thanks a lot for your interest

francesco

define centroid

On Mon, Mar 30, 2015 at 11:32 PM, Eric Pettersen <pett@cgl.ucsf.edu> wrote:

Hi Francesco,
It should be available as the atom attribute pdbSegment, e.g. "color red @/pdbSegment=XY2". If that doesn't work, please let me know and attach a PDB file with segment info in it that I can use for testing.

--Eric

  Eric Pettersen
  UCSF Computer Graphics Lab
  http://www.cgl.ucsf.edu

On Mar 28, 2015, at 6:34 AM, Francesco Pietra <chiendarret@gmail.com> wrote:

Hello:

May I ask whether there is till a problem in having CHIMERA understanding segname? For those working with XPLOR (NAMD, for example) and multichain proteins, rendering results with CHIMERA becomes very tedious (having to use atom indexes)

Thanks
francesco pietra
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