The iterations are independent. So you could iterate twice, save a session, and then iterate further later. You could use the 'Save' button on the Reply Log to save info as needed.

P.S. Sorry it's slow. It's all in Python and given how complex it is it's unlikely it's going to be recoded in C++ anytime soon.

Eric Pettersen

UCSF Computer Graphics Lab

http://www.cgl.ucsf.edu

On Oct 27, 2009, at 7:47 AM, Mario Borgnia wrote:

Hi,
I launched a massive match-align procedure with five iterations without knowing
that it would take so long to complete. Is it possible to stop it at iteration 2
without loosing the information computed to that point? Also, is it possible to
continue from that point on in a subsequent round?
Thanks!

Mario