OK. So I've managed to 'resolve' this. Though it will not work if I install 'colorbrewer' on my system. The solution is to set a .pth file in the system site-packages folder e.g. chimera.pth with the path to Chimera site-packages (e.g. /Applications/Chimera.app/Contents/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages) That did it for me. Paul On 16/02/2016 12:08, Paul Kibet Korir wrote:
Hi,
I want to use the chimera API and I've managed to configure a successful import of chimera except that I get that colorbrewer is not installed.
import chimera Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/Applications/Chimera.app/Contents/Resources/share/chimera/__init__.py", line 73, in <module> import palettes File "/Applications/Chimera.app/Contents/Resources/share/chimera/palettes.py", line 103, in <module> _initPresets() File "/Applications/Chimera.app/Contents/Resources/share/chimera/palettes.py", line 95, in _initPresets from colorbrewer import ColorBrewer ImportError: cannot import name ColorBrewer
What is the right way to go about this? (I could create a symbolic link to my system colorbrewer, but that doesn't seem clean).
-- With kind regards,
*Paul K Korir, PhD* /Scientific Programmer/ EMBL-EBI Main Building, A2-35, WTGC, Hinxton, Cambridge CB10 1SD P: +44 1223 49 44 22 F: +44 1223 49 44 68
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-- With kind regards, *Paul K Korir, PhD* /Scientific Programmer/ EMBL-EBI Main Building, A2-35, WTGC, Hinxton, Cambridge CB10 1SD P: +44 1223 49 44 22 F: +44 1223 49 44 68