On 4/21/20 8:40 PM, Kenward Vaughan wrote:
...

> The command I use is > > intersurf :.b :.k,.m pair atom prune 3 bias 0.5 select > true > > followed by adjusting the transparency. The result surprised me, > both before and after lighting up the atoms and bonds. I've attached > a (hopefully small) jpg. > ...

By the way, I just realized with further experimentation that a prune distance of 3 gives NO result ("no interface found") using the graphical interface with chain B and either K or M.  Changing this to 10 in my command still gives the same weird results...

Kenward
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