Eric,
That was the first thing I tried. I received this error:
"(base) DHVI-F5KJC04Q:pythonProject edwardslab$ chimera --nogui --script get-pip.py
-bash: chimera: command not found
Thanks,
Garrett Scapellato
Research Technician II
Edwards Lab
DHVI
Duke University
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You do not put "chimera --nogui --script get-pip.py" into a Python file and execute it using your system python3. You execute the command
directly in the Unix shell.
--Eric
This error, the first one in the previous email.
Garrett Scapellato
Research Technician II
Edwards Lab
DHVI
Duke University
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Hi Garrett,
Using your system installer will not install pandas into Chimera's Python interpreter, which is why you need to install pip into Chimera with the get-pip.py script. You do that with "chimera --nogui --script get-pip.py" from the Unix shell, not from within Chimera. What happened when you tried it from the Unix shell?
--Eric
Eric Pettersen
UCSF Computer Graphics Lab
Eric,
I've tried installing pip to chimera using that code both in my terminal and in chimera, but I get syntax errors. Just in case it is important, I will note that I skipped the first step of installing the pip installer, because my computer already has a python pip installer.
Thanks,
Garrett Scapellato
Research Technician II
Edwards Lab
DHVI
Duke University
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Hi Garrett,
--Eric
Eric Pettersen
UCSF Computer Graphics Lab
Chimera Help,
Hello, I hope you are doing well. I am attempting to use the "pandas" module while using Chimera to read python code. I receive this error any time I do. I am able to use pandas while using other python interpreters on my computer. I am also able to use other modules, such as NumPy when using Chimera to run python code. Any help in this issue would be greatly appreciated.
Thank you for your time,
Garrett Scapellato
Research Technician II
Edwards Lab
DHVI
Duke University
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