Dear Sir,<div><br></div><div>I am a beginner in  the field of molecular docking. However, I started doing it using Chimera Vina. UCSF Chimera 1.13rc provides the interface while AutoDock Vina does the docking part.</div><div><br></div><div>For a couple of cases I have found that inspite of keeping all the parameters same, the best obtained dock scores are coming different for each individual job-run. Is it so because it is a stocastic method? With such different dock scores, what should I do?</div><div><br></div><div>I will be extremely grateful of you can kindly address this issue.</div><div><br></div><div>Thanking you in advance,</div><div><br></div><div>Best regards</div><br><br>-- <br><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><font face="garamond, serif" size="2"><b>Prabuddha Bhattacharya </b></font></div><div><br></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div><br>