Hi Maik, I don't know of a non-cumbersome way. If you are adept at Python programming, the function that the match command calls is Midas.match(), defined in that module's __init__.py file, and you could lift the code that does the match and computes the matrix from there. The Midas module is found in <your Chimera installation>/share/Midas on Windows/Linux and in Chimera.app/Contents/Resources/share/Midas on Mac. --Eric Eric Pettersen UCSF Computer Graphics Lab
On Oct 5, 2021, at 6:35 AM, Engeholm, Maik via Chimera-users <chimera-users@cgl.ucsf.edu> wrote:
Hi there,
I'm trying to superimpose two models from inside a python script and get back the transformation matrix. I know I can do something like
chimera.runCommand("match #1 #0 showMatrix true")
but then the matrix is written to the ReplyLog. (Of course I could save the ReplyLog and then read it in from my script to access the matrix, but that seems quite cumbersome.) Is there a better way to do this?
Cheers,
Maik
_______________________________________________ Chimera-users mailing list: Chimera-users@cgl.ucsf.edu <mailto:Chimera-users@cgl.ucsf.edu> Manage subscription: https://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users <https://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users>