10 Jul
2006
10 Jul
'06
11:23 p.m.
I accidentally provided a link to the Multalign Viewer man page instead of the one for MatchMaker, but what I said is accurate; the description of matching is essentially the same in those two places. Here are the more appropriate MatchMaker links: http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/mmaker.html (command) http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/matchmaker/ matchmaker.html (GUI) On Jul 10, 2006, at 4:13 PM, Elaine Meng wrote:
The superposition is a least-squares fit of the alpha-carbons of the residue pairs aligned in the sequence alignment: http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/ multalignviewer/multalignviewer.html#superposition