Dear Chimera Team,

In my homology model (see attachment) it looks like there has been some issue with secondary structure recognition in one of the domains (highlighted in cyan). In .py file I added one of the protein templates (yellow) based on which the C-terminal domain was constructed. I am not sure what has happened to a final model, since template for that domain looks good. I was wondering if there is an option in Chimera which could fix that issue?

Thank you for your time,
Sincerely,
Monika Lukaszewska

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Monika Lukaszewska, Ph.D.

Senior Research Scientist
Chemistry & Biochemistry Department
Montana State University
Bozeman MT, 59717
lab: (406) 994 5418
tokminalukas@montana.edu