Dear Chimera company

Thank you for always answering my questions so carefully.

I entered the data as per the manual. However, the hydrogen bond did not show up. What should I do?

Details on how to do it

Display interactions between ligand and protein.

1.Favorites→Model Panel→group/ungroup( Go down at close.)

2.Favorite→Command line: combine #0.1,0.2

→select combination at model Panel

 

3.rename 

4.Select →Residue→ LIG　or command: select :LIG

5.Tool→Surface/Binding Analysis→ Find H Bond

Check three points

1."Only find H-bonds..."  e.g. "with at least one end selected".

2.  "If endpoint atom hidden, shown endpoint residue" or else it will not show all of the H-bonds it finds

3.Write information to reply log

Apply→OK