Hi Sushree, Why does your "vop boxes” command use model #0 for both the map and the markers? That can’t be right. If your marker(s) are in model #1 you would need “vop boxes #0 #1 size 36”. What are you trying to do? http://www.cgl.ucsf.edu/chimera/current/docs/UsersGuide/midas/vop.html#boxes Tom
On Apr 15, 2015, at 1:03 PM, Sushree Tripathy wrote:
Hi,
I went through the chimera user's guide and as per the syntax used "vop boxes #0 #0 useMarkerSize true" or "vop boxes #0 #0 size 36" (the simplest case) to create a cubic box from my density map (54, 36, 51). It is neither giving me any error nor giving me the output map.
Please help. Thanks Sushree.
Sushree Tripathy Graduate Student Department of Physics University at Buffalo _______________________________________________ Chimera-users mailing list Chimera-users@cgl.ucsf.edu http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users