[Chimera-users] defining a putative binding site

Hi: I need to define a putative binding site for a smaller protein upon a larger one. The task is creating a table of likely interactions between residues of the larger proteinseparated by less than 5 A from those of the smaller protein. Deriving from molecular dynamics, all residues for both proteins are in the same pdb file, alongside lipid, water, etc. I wonder whether the most appropriate way is to separate in two different pdb files the lines belonging to the two different proteins. Then: sel #0:20,30-40,55 & #1:1701-1793 z<5 where "0" is the larger and "1" is the smaller protein. If OK, can the results be obtained in a table form? Thanks francesco pietra