Hi Elaine, Thank you for fixing the bug! It worked with the daily build! Eita On Thu, Aug 11, 2016 at 9:36 PM, Elaine Meng <meng@cgl.ucsf.edu> wrote:
In case anybody else on the list was interested, this bug will be fixed in the next Chimera daily build, which should be available by tomorrow from:
<http://www.rbvi.ucsf.edu/chimera/download.html#daily>
Best, Elaine
On Aug 11, 2016, at 9:33 AM, Elaine Meng <meng@cgl.ucsf.edu> wrote:
Hi Eita, This appears to be a bug… when I tried it I got a traceback. Normally I’d suggest you file a bug report (menu: Help… Report a Bug), but since I was able to reproduce the problem myself, I will file the report and include your email address for notification of a fix. Thanks for letting us know about the problem, and sorry for the inconvenience. Best, Elaine ---------- Elaine C. Meng, Ph.D. UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco
On Aug 11, 2016, at 6:43 AM, Eita Sasaki <sasaki@org.chem.ethz.ch> wrote:
Hi, I'd like to run APBS command with mobile ions (150 mM NaCl). I tried the following command, but it did not work.
apbs molecule #1 ion true _posion 1,0.15,1.16 _negion -1,0.15,1.67
If I typed just "apbs molecule #1" it works (without mobile ions). I am wondering my command was perhaps wrong but don't know the right one.
I hope you could help me to solve the problem Thank you in advance. Eita