ChimeraX, the follow on to Chimera, does what you suggest.  Chimera is reaching the end of its life, so it will not be getting any breaking changes.

    -- Greg

Dears all,

I realised that you are using a hidden folder (.chimera/) in $HOME directory, linux's distribution.

Have you considered supporting freedesktop.org's standard specs?

References:

- http://standards.freedesktop.org/basedir-spec/basedir-spec-latest.html
- https://wiki.archlinux.org/index.php/XDG_Base_Directory

All the best,

Martín

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