Sorry, but this is way too hard. That part of Chimera simply was not designed for scripting. ChimeraX is much better at allowing scripting, but it doesn't have the clustering functionality you need.

--Eric

Eric Pettersen

UCSF Computer Graphics Lab

On Jul 16, 2020, at 5:05 AM, Ibrahim Mohamed <hollow_ichigo199799@yahoo.com> wrote:

Greeting sir,
i want to use chimera (V 1.14) on a super computer to cluster the results from NAMD .dcd file but i found that it can be used only through the GUI.
Is there a way to cluster the results from .dcd file using a script?
if it is possible please send me the script
thanks
_______________________________________________
Chimera-users mailing list: Chimera-users@cgl.ucsf.edu
Manage subscription: https://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users