To wrap up this thread, I've attached a Python script that reads an AutoDock log file and generates a PDB file suitable for use with Chimera's ViewDock extension. Conrad On 10/29/2009 10:00 AM, Conrad Huang wrote:
Unfortunately, ViewDock does not read AutoDock files yet. Can you please send me some sample files and I'll see what I can do with them? Thanks.
Conrad
Miriam Gochin wrote:
I have a series of docked ligands produced by AutoDock (as .dlg files, containing more than one conformer per ligand) and I would love to be able to view these ligands using the ViewDock utility in Chimera. Is there a file conversion protocol?
Thanks so much,
Miriam Gochin Touro University - CA miriam.gochin@tu.edu 707-638-5463 _______________________________________________ Chimera-users mailing list Chimera-users@cgl.ucsf.edu http://www.cgl.ucsf.edu/mailman/listinfo/chimera-users