See the "Save relative to" near the bottom of the PDB Save dialog. In your image it is saving relative to #0, a pdb file. You need to change the model in that line to the map model. You can check in the Model Panel (menu: Favorites... Model Panel) to see which models are which numbers. I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On May 11, 2020, at 9:01 PM, 李雄俊 <lixiongjun228@qq.com> wrote:
Hello: I dragged a partial thread pdb to dock a volume map with UCSF-Chemira, but when I saved the pdb, and open the new pdb and the mrc file, they are still uncouple. Please point out the mistakes in my method, thank you very much. <30FDE806@C4B4D716.A81FBA5E.jpg> fig 1. Yellow chain is the partial thread pdb, pink one is native pdb, grey one is the volume data.
<3100E200@AE407D4E.A81FBA5E.jpg> fig 2. After dragging, docked pdb and volume data
<2CFDE501@53897A73.A81FBA5E.jpg> Fig 3. options of 'save pdb'
After these actions, pdb and mrc are still uncouple when I reopen them in another Chemira.