It looks like you're missing header files from some development package. I'm not a Linux expert, but my guess is "glibc-devel" or "glibc-headers". Try running "yum install glibc-headers" and see if that helps. Conrad Vinay Kumar wrote:
Hello all, I had installed DMS previously. And recently upgraded my OS to fedora 8. When i try to recompile dms this is the following error i get. I did not face this the previous time!! could anyone guide me??
Regards Vinay
Following is the error -----
[hpws@localhost dms]$ make cd libpdb ; make OPT="-O" make[1]: Entering directory `/home/hpws/dms/libpdb' cc -O -c -o pdb_read.o pdb_read.c pdb_read.c:25:20: error: stdio.h: No such file or directory pdb_read.c:26:20: error: ctype.h: No such file or directory pdb_read.c:27:21: error: string.h: No such file or directory In file included from pdb_int.h:20, from pdb_read.c:28: pdb.h:516: error: expected ')' before '*' token pdb.h:518: error: expected ')' before '*' token In file included from pdb_read.c:37: read_format.i:19: error: 'NULL' undeclared here (not in a function) In file included from pdb_read.c:45: pdbrun6_read.i:45: error: initializer element is not constant pdbrun6_read.i:45: error: (near initialization for 'pdbrun6[26]') pdbrun6_read.i:46: error: initializer element is not constant pdbrun6_read.i:46: error: (near initialization for 'pdbrun6[27]') pdbrun6_read.i:47: error: initializer element is not constant pdbrun6_read.i:47: error: (near initialization for 'pdbrun6[28]') pdbrun6_read.i:48: error: initializer element is not constant pdbrun6_read.i:48: error: (near initialization for 'pdbrun6[29]') pdb_read.c:59: error: expected ')' before '*' token pdb_read.c: In function 'pdb_read_string': pdb_read.c:304: warning: incompatible implicit declaration of built-in function 'memset' pdb_read.c:556: warning: incompatible implicit declaration of built-in function 'strncpy' pdb_read.c:913: warning: incompatible implicit declaration of built-in function 'sscanf' pdb_read.c:978: warning: incompatible implicit declaration of built-in function 'sscanf' pdb_read.c:992: warning: incompatible implicit declaration of built-in function 'sscanf' pdb_read.c:1027: warning: incompatible implicit declaration of built-in function 'sscanf' pdb_read.c:1047: warning: incompatible implicit declaration of built-in function 'sscanf' pdb_read.c:1076: warning: incompatible implicit declaration of built-in function 'sscanf' pdb_read.c:1094: warning: incompatible implicit declaration of built-in function 'sscanf' make[1]: *** [pdb_read.o] Error 1 make[1]: Leaving directory `/home/hpws/dms/libpdb' make: *** [pdb] Error 2 _______________________________________________ Chimera-users mailing list Chimera-users@cgl.ucsf.edu http://www.cgl.ucsf.edu/mailman/listinfo/chimera-users