Hello,

We are currently developing an educational exercise in Chimera for building different inhibitors in different proteases, using Chimera and then using AutoDock Vina for finding potential docking sites. I was wondering if there is a function in Chimera for doing a conformational search that we could do  to find the lowest energy conformer before running AutoDock Vina?  

Thank you,

Maj Krumberger

Graduate Student - Nowick Group
Department of Chemistry



University of California, Irvine
4302 Natural Sciences I
Irvine, CA 92697-2025