Hi all,
I use measure command to calculate the buried area between capsomer and Fab. My input file is pentamer.pdb and Fab.pdb. I made surface model for them respectively and use the command line as shown below:
measure buriedArea #3 #2 probeRadius 1.4
However, it replied as “Surface calculation failed”
I tried also delete all non-binding units in the pentamer, it still can not work.
Does anyone know how to deal with that? Thank you so much.
Sincerely yours,
Jian