Dear Dr. Selvaraj, Probably you just need to display the atoms, command “display” or menu: Actions… Atoms/Bonds… show. This is just a general part of using Chimera. I recommend going through the “Getting Started” tutorial to become more familiar with the program: <http://www.rbvi.ucsf.edu/Outreach/Tutorials/GettingStarted.html> Good luck, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Sep 30, 2017, at 4:57 AM, Gurudeeban Selvaraj <gurudeeb99@qq.com> wrote:
Dear Dr.Elaine,
Thanks for the information. It is working now but some of them I could not see hydrogen bonds (Intra). Now I could not see the ligand structure of the docked result in Chimera.
I have enclosed file and snap shot of my issue. Let me know, what will do?
<3_8_sol_3.ref.pdb><image.jpg>