Hi Dan, You're right, currently the "save PDB" dialog and "write" commands, although they do have trajectory-specific options, can only save all the loaded frames into a single file. The workaround is to first write the loaded frames of the trajectory as a single, multi-MODEL file, then read that file back in as a regular PDB file (instead of as a trajectory). Then the frames will be loaded as multiple models and you can avail yourself of the multi- model option in the "save PDB" dialog for saving multiple files. I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco On Feb 16, 2010, at 12:44 PM, Dan Gurnon wrote:
Hi everyone, How would one write a trajectory read into MD Movie to a series of pdb files instead of one large file? I don't see a suitable option specified for the "write" command, and for "Save PDB" it seems the option of multiple files is only available when multiple models are selected. Dan