Hello all,<br><br>1) I have to superimpose two protein structures based on sequence matching say prot1 and prot2. Precisely matchmaker. <br>My prot1 is a cryo electron microscopy structure, the structure is not continuous, it has missing residues and hence its pdb contains 3 Chains.<br>
My prot2 is a crystal structure, having one chain. I need your suggestion in superimposing these two structure wherever the sequences are matching.<br><br>What i tried:<br>I opened pro1 pdb and changed all chain names as A ( it contains chain A,B,C). Then i tried to superimpose with prot2, but matchmaker doesn work.<br>
<br>2) when i open molecules one by one, i need all the molecules appear in the center of the chimera window. How to set this in chimera. After opening the first pdb, when i open the second one, it is invisible. <br><br>Thanks,<br>
Bala<br>