Hi Ahmad, There’s not really that many steps to it. You just need to select the markers and then use the Color Zone tool. There is a little more description here <http://www.rbvi.ucsf.edu/chimera/data/tutorials/volumetour/volumetour.html#colorzone> ...and in the Color Zone manual page: <http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/colorzone/colorzone.html> As mentioned in that page, you can also do it with the “scolor” command “zone” option. <http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/scolor.html#zone> I hope this helps, Elaine ----- Elaine C. Meng, Ph.D. UCSF Chimera(X) team Department of Pharmaceutical Chemistry University of California, San Francisco
On Jan 17, 2019, at 9:19 AM, Ahmad Khalifa <underoath006@gmail.com> wrote:
I know I can use volume tracer to place markers in the density. There was a tutorial explaining the use of these markers to color certain areas of my density map, however I lost track of it.
Best regards.