Dear Chimera

Thank you for taking the time to answer my question the other day.

I also apologize for contacting you outside of business hours due to the time difference.

I'm Kenji Matsui, a second-year master's student at a national university in Japan.

I am looking at ligand-protein interactions and how they affect binding affinity.

Therefore, I would like to examine the hydrophobicity and hydrophilicity around the ligand in the figure below（second photo,）.

image10.png       


image.png
　　　　second photo


Methods Tried
select→ligand→Focus

This method causes some parts of the surface to be difficult to see.
As shown in the second photo, it is difficult to see the degree of hydrophobicity around the ligand.

image.png

Please confirm.

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Kenji Matsui
 Graduate School of Tokyo University of Agriculture and Technology　M2
2-24-16, Nakamachi, Koganei-shi, Tokyo 184-8588, Japan